IL_8G5Z_165

3D structure

PDB id

8G5Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

A(OMG)ACAU(PSU)U*ACCA(PSU)CU

Length

15 nucleotides

Bulged bases

8G5Z|1|L5|C|4670

QA status

Modified nucleotides: OMG, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G5Z|1|L5|A|4622
8G5Z|1|L5|OMG|4623
8G5Z|1|L5|A|4624
8G5Z|1|L5|C|4625
8G5Z|1|L5|A|4626
8G5Z|1|L5|U|4627
8G5Z|1|L5|PSU|4628
8G5Z|1|L5|U|4629
*
8G5Z|1|L5|A|4669
8G5Z|1|L5|C|4670
8G5Z|1|L5|C|4671
8G5Z|1|L5|A|4672
8G5Z|1|L5|PSU|4673
8G5Z|1|L5|C|4674
8G5Z|1|L5|U|4675

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LV

60S ribosomal protein L23

Chain LW

eL24