IL_8G5Z_204

3D structure

PDB id

8G5Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

U(OMU)CC(PSU)U(OMU)G*CAUUCGA

Length

15 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G5Z|1|S2|U|115
8G5Z|1|S2|OMU|116
8G5Z|1|S2|C|117
8G5Z|1|S2|C|118
8G5Z|1|S2|PSU|119
8G5Z|1|S2|U|120
8G5Z|1|S2|OMU|121
8G5Z|1|S2|G|122
*
8G5Z|1|S2|C|342
8G5Z|1|S2|A|343
8G5Z|1|S2|U|344
8G5Z|1|S2|U|345
8G5Z|1|S2|C|346
8G5Z|1|S2|G|347
8G5Z|1|S2|A|348

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

eS4

Chain SI

40S ribosomal protein S8