IL_8G5Z_211

3D structure

PDB id

8G5Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

CAGUG*C(PSU)AG

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G5Z|1|S2|C|223
8G5Z|1|S2|A|224
8G5Z|1|S2|G|225
8G5Z|1|S2|U|287
8G5Z|1|S2|G|288
*
8G5Z|1|S2|C|295
8G5Z|1|S2|PSU|296
8G5Z|1|S2|A|297
8G5Z|1|S2|G|298

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

eS4

Chain SG

40S ribosomal protein S6

Chain SI

40S ribosomal protein S8

Chain SL

uS17