IL_8G5Z_260

3D structure

PDB id

8G5Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

A(OMU)UG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G5Z|1|S2|A|1287
8G5Z|1|S2|OMU|1288
8G5Z|1|S2|U|1289
8G5Z|1|S2|G|1290
*
8G5Z|1|S2|C|1309
8G5Z|1|S2|U|1310
8G5Z|1|S2|C|1311
8G5Z|1|S2|G|1312
8G5Z|1|S2|A|1313
8G5Z|1|S2|U|1314

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SK

eS10

Chain SM

eS12

Chain Sd

40S ribosomal protein S29

Chain Sf

eS31