IL_8G60_028

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8G60|1|L5|U|467, 8G60|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G60|1|L5|A|466
8G60|1|L5|U|467
8G60|1|L5|U|468
8G60|1|L5|C|469
8G60|1|L5|A|470
8G60|1|L5|A|471
8G60|1|L5|C|472
*
8G60|1|L5|G|682
8G60|1|L5|C|683
8G60|1|L5|G|684
8G60|1|L5|C|685
8G60|1|L5|A|686
8G60|1|L5|U|687
8G60|1|L5|U|688
8G60|1|L5|U|689

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

eL6

Chain Lr

eL28