IL_8G60_039

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

8G60|1|L5|A|932, 8G60|1|L5|C|934, 8G60|1|L5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G60|1|L5|A|732
8G60|1|L5|A|733
8G60|1|L5|G|734
8G60|1|L5|G|735
*
8G60|1|L5|C|928
8G60|1|L5|A|929
8G60|1|L5|G|930
8G60|1|L5|C|931
8G60|1|L5|A|932
8G60|1|L5|G|933
8G60|1|L5|C|934
8G60|1|L5|A|935
8G60|1|L5|C|936
8G60|1|L5|U|937

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

uL4

Chain LM

eL14

Chain LS

eL20