3D structure

PDB id
8G60 (explore in PDB, NAKB, or RNA 3D Hub)
Description
mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.54 Å

Loop

Sequence
CCG*CCG
Length
6 nucleotides
Bulged bases
8G60|1|L5|C|738, 8G60|1|L5|C|925
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8G60_040 not in the Motif Atlas
Geometric match to IL_5J7L_341
Geometric discrepancy: 0.2316
The information below is about IL_5J7L_341
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_42626.2
Basepair signature
cWW-cWW
Number of instances in this motif group
14

Unit IDs

8G60|1|L5|C|737
8G60|1|L5|C|738
8G60|1|L5|G|739
*
8G60|1|L5|C|924
8G60|1|L5|C|925
8G60|1|L5|G|926

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LC
uL4
Chain LM
eL14

Coloring options:


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