IL_8G60_056

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CGC*GG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G60_056 not in the Motif Atlas

Geometric match to IL_7A0S_005

Geometric discrepancy: 0.2137

The information below is about IL_7A0S_005

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

8G60|1|L5|C|1474
8G60|1|L5|G|1475
8G60|1|L5|C|1476
*
8G60|1|L5|G|1489
8G60|1|L5|G|1490

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LL

eL13

Chain La

uL15

Chain Lb

eL29

Chain Lo

eL42