IL_8G60_058

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CC(OMG)A(A2M)AG*CUAGUAGCUG

Length

17 nucleotides

Bulged bases

8G60|1|L5|A|1650, 8G60|1|L5|G|1654

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G60|1|L5|C|1520
8G60|1|L5|C|1521
8G60|1|L5|OMG|1522
8G60|1|L5|A|1523
8G60|1|L5|A2M|1524
8G60|1|L5|A|1525
8G60|1|L5|G|1526
*
8G60|1|L5|C|1648
8G60|1|L5|U|1649
8G60|1|L5|A|1650
8G60|1|L5|G|1651
8G60|1|L5|U|1652
8G60|1|L5|A|1653
8G60|1|L5|G|1654
8G60|1|L5|C|1655
8G60|1|L5|U|1656
8G60|1|L5|G|1657

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

uL4

Chain LL

eL13

Chain LN

eL15

Chain La

uL15

Chain Lj

eL37