IL_8G60_172

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CCUCGGAUAG*UGCGGAGUG

Length

19 nucleotides

Bulged bases

8G60|1|L5|A|4764, 8G60|1|L5|G|4870, 8G60|1|L5|G|4873, 8G60|1|L5|U|4876

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G60|1|L5|C|4756
8G60|1|L5|C|4757
8G60|1|L5|U|4758
8G60|1|L5|C|4759
8G60|1|L5|G|4760
8G60|1|L5|G|4761
8G60|1|L5|A|4762
8G60|1|L5|U|4763
8G60|1|L5|A|4764
8G60|1|L5|G|4765
*
8G60|1|L5|U|4869
8G60|1|L5|G|4870
8G60|1|L5|C|4871
8G60|1|L5|G|4872
8G60|1|L5|G|4873
8G60|1|L5|A|4874
8G60|1|L5|G|4875
8G60|1|L5|U|4876
8G60|1|L5|G|4877

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

eL6

Chain LH

uL6

Chain LM

eL14

Chain LO

uL13

Chain LS

eL20