IL_8G60_204

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GU*ACC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G60_204 not in the Motif Atlas

Geometric match to IL_4V88_388

Geometric discrepancy: 0.1832

The information below is about IL_4V88_388

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_18604.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

46

Unit IDs

8G60|1|S2|G|123
8G60|1|S2|U|124
*
8G60|1|S2|A|339
8G60|1|S2|C|340
8G60|1|S2|C|341

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

eS4

Chain SG

eS6

Chain SI

eS8