IL_8G60_234

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GAAAAAA(PSU)(PSU)A*UACCGCAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G60|1|S2|G|807
8G60|1|S2|A|808
8G60|1|S2|A|809
8G60|1|S2|A|810
8G60|1|S2|A|811
8G60|1|S2|A|812
8G60|1|S2|A|813
8G60|1|S2|PSU|814
8G60|1|S2|PSU|815
8G60|1|S2|A|816
*
8G60|1|S2|U|848
8G60|1|S2|A|849
8G60|1|S2|C|850
8G60|1|S2|C|851
8G60|1|S2|G|852
8G60|1|S2|C|853
8G60|1|S2|A|854
8G60|1|S2|G|855
8G60|1|S2|C|856

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

eS4

Chain SJ

uS4

Chain SL

uS17

Chain SW

uS8