3D structure

PDB id
8G60 (explore in PDB, NAKB, or RNA 3D Hub)
Description
mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.54 Å

Loop

Sequence
GCUCAGCGUG*CCGUUGAACCC
Length
21 nucleotides
Bulged bases
8G60|1|S2|U|1585, 8G60|1|S2|G|1587
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8G60|1|S2|G|1541
8G60|1|S2|C|1542
8G60|1|S2|U|1543
8G60|1|S2|C|1544
8G60|1|S2|A|1545
8G60|1|S2|G|1546
8G60|1|S2|C|1547
8G60|1|S2|G|1548
8G60|1|S2|U|1549
8G60|1|S2|G|1550
*
8G60|1|S2|C|1582
8G60|1|S2|C|1583
8G60|1|S2|G|1584
8G60|1|S2|U|1585
8G60|1|S2|U|1586
8G60|1|S2|G|1587
8G60|1|S2|A|1588
8G60|1|S2|A|1589
8G60|1|S2|C|1590
8G60|1|S2|C|1591
8G60|1|S2|C|1592

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SD
uS3
Chain SF
uS7
Chain SQ
uS9
Chain ST
eS19
Chain SU
uS10
Chain SZ
eS25
Chain Sd
uS14

Coloring options:

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