IL_8G6J_069

3D structure

PDB id

8G6J (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GAUUAGAG*C(PSU)A(PSU)(PSU)CUC

Length

16 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G6J|1|L5|G|1745
8G6J|1|L5|A|1746
8G6J|1|L5|U|1747
8G6J|1|L5|U|1748
8G6J|1|L5|A|1749
8G6J|1|L5|G|1750
8G6J|1|L5|A|1751
8G6J|1|L5|G|1752
*
8G6J|1|L5|C|1778
8G6J|1|L5|PSU|1779
8G6J|1|L5|A|1780
8G6J|1|L5|PSU|1781
8G6J|1|L5|PSU|1782
8G6J|1|L5|C|1783
8G6J|1|L5|U|1784
8G6J|1|L5|C|1785

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LD

60S ribosomal protein L5

Chain LI

60S ribosomal protein L10