IL_8G6J_206

3D structure

PDB id

8G6J (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCCACUU*AUGCCGAC

Length

15 nucleotides

Bulged bases

8G6J|1|S2|C|139, 8G6J|1|S2|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G6J|1|S2|G|130
8G6J|1|S2|C|139
8G6J|1|S2|C|140
8G6J|1|S2|A|141
8G6J|1|S2|C|142
8G6J|1|S2|U|143
8G6J|1|S2|U|144
*
8G6J|1|S2|A|175
8G6J|1|S2|U|176
8G6J|1|S2|G|177
8G6J|1|S2|C|178
8G6J|1|S2|C|179
8G6J|1|S2|G|180
8G6J|1|S2|A|181
8G6J|1|S2|C|182

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SG

40S ribosomal protein S6