IL_8G6J_207

3D structure

PDB id

8G6J (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UGGAUAAC*GCUAA(OMU)A(OMC)A

Length

17 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G6J|1|S2|U|144
8G6J|1|S2|G|145
8G6J|1|S2|G|146
8G6J|1|S2|A|147
8G6J|1|S2|U|148
8G6J|1|S2|A|149
8G6J|1|S2|A|150
8G6J|1|S2|C|151
*
8G6J|1|S2|G|167
8G6J|1|S2|C|168
8G6J|1|S2|U|169
8G6J|1|S2|A|170
8G6J|1|S2|A|171
8G6J|1|S2|OMU|172
8G6J|1|S2|A|173
8G6J|1|S2|OMC|174
8G6J|1|S2|A|175

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LW

60S ribosomal protein L24

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24