IL_8G6J_233

3D structure

PDB id

8G6J (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

U(PSU)AC*GAA(PSU)AA

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G6J|1|S2|U|800
8G6J|1|S2|PSU|801
8G6J|1|S2|A|802
8G6J|1|S2|C|803
*
8G6J|1|S2|G|860
8G6J|1|S2|A|861
8G6J|1|S2|A|862
8G6J|1|S2|PSU|863
8G6J|1|S2|A|864
8G6J|1|S2|A|865

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SH

40S ribosomal protein S7

Chain SL

40S ribosomal protein S11

Chain SW

40S ribosomal protein S15a

Chain SX

uS12