IL_8G6J_314

3D structure

PDB id

8G6J (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

(PSU)UG*UG

Length

5 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G6J_314 not in the Motif Atlas

Homologous match to IL_8P9A_331

Geometric discrepancy: 0.3324

The information below is about IL_8P9A_331

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46637.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

20

Unit IDs

8G6J|1|L5|PSU|4403
8G6J|1|L5|U|4404
8G6J|1|L5|G|4405
*
8G6J|1|L5|U|4439
8G6J|1|L5|G|4440

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LI

60S ribosomal protein L10