IL_8G6W_118

3D structure

PDB id

8G6W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe

Experimental method

ELECTRON MICROSCOPY

Resolution

2.02 Å

Loop

Sequence

UGUAGG*CUGAGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G6W_118 not in the Motif Atlas

Geometric match to IL_8ZA4_003

Geometric discrepancy: 0.3429

The information below is about IL_8ZA4_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_35186.2

Basepair signature

cWW-tSH-tHW-L-R-cWW-cWW

Number of instances in this motif group

6

Unit IDs

8G6W|1|a|U|1474
8G6W|1|a|G|1475
8G6W|1|a|U|1476
8G6W|1|a|A|1477
8G6W|1|a|G|1478
8G6W|1|a|G|1479
*
8G6W|1|a|C|1512
8G6W|1|a|U|1513
8G6W|1|a|G|1514
8G6W|1|a|A|1515
8G6W|1|a|G|1516
8G6W|1|a|G|1517

Current chains

Chain a

23S rRNA

Nearby chains