IL_8G6Y_033
3D structure
- PDB id
- 8G6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.09 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 8G6Y|1|a|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8G6Y_033 not in the Motif Atlas
- Homologous match to IL_5J7L_277
- Geometric discrepancy: 0.0466
- The information below is about IL_5J7L_277
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
8G6Y|1|a|C|998
8G6Y|1|a|U|999
8G6Y|1|a|A|1000
8G6Y|1|a|A|1001
8G6Y|1|a|G|1002
*
8G6Y|1|a|C|1153
8G6Y|1|a|G|1154
8G6Y|1|a|A|1155
8G6Y|1|a|A|1156
8G6Y|1|a|G|1157
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain b
- 5S ribosomal RNA; 5S rRNA
- Chain p
- 50S ribosomal protein L20
- Chain q
- Ribosomal protein L21
- Chain y
- 50S ribosomal protein L30
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