IL_8G7Q_078

3D structure

PDB id

8G7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GU(G7M)A*UCC

Length

7 nucleotides

Bulged bases

8G7Q|1|A|U|2068

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G7Q_078 not in the Motif Atlas

Geometric match to IL_5C5W_002

Geometric discrepancy: 0.1829

The information below is about IL_5C5W_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

8G7Q|1|A|G|2067
8G7Q|1|A|U|2068
8G7Q|1|A|G7M|2069
8G7Q|1|A|A|2070
*
8G7Q|1|A|U|2441
8G7Q|1|A|C|2442
8G7Q|1|A|C|2443

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain N

50S ribosomal protein L15