3D structure

PDB id
8G7R (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
UUU*AUG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8G7R_030 not in the Motif Atlas
Homologous match to IL_5J7L_273
Geometric discrepancy: 0.1536
The information below is about IL_5J7L_273
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_28037.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
65

Unit IDs

8G7R|1|A|U|870
8G7R|1|A|U|871
8G7R|1|A|U|872
*
8G7R|1|A|A|905
8G7R|1|A|U|906
8G7R|1|A|G|907

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain O
50S ribosomal protein L16

Coloring options:


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