IL_8G7S_009

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G7S_009 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.361

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

8G7S|1|A|C|274
8G7S|1|A|C|275
8G7S|1|A|U|276
8G7S|1|A|G|277
8G7S|1|A|A|278
8G7S|1|A|A|279
8G7S|1|A|U|280
8G7S|1|A|C|281
*
8G7S|1|A|G|359
8G7S|1|A|U|360
8G7S|1|A|G|361
8G7S|1|A|A|362
8G7S|1|A|G|363

Current chains

Chain A

23S Ribosomal RNA

Nearby chains