IL_8G7S_030

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGG*CUUAC

Length

9 nucleotides

Bulged bases

8G7S|1|A|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8G7S_030 not in the Motif Atlas

Geometric match to IL_4WF9_109

Geometric discrepancy: 0.3101

The information below is about IL_4WF9_109

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_30621.4

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

66

Unit IDs

8G7S|1|A|G|880
8G7S|1|A|G|881
8G7S|1|A|G|882
8G7S|1|A|G|883
*
8G7S|1|A|C|893
8G7S|1|A|U|894
8G7S|1|A|U|895
8G7S|1|A|A|896
8G7S|1|A|C|897

Current chains

Chain A

23S Ribosomal RNA

Nearby chains