IL_8H6L_004
3D structure
- PDB id
- 8H6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of human exon-defined spliceosome in the early B state.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CAAUGAG*CGAG
- Length
- 11 nucleotides
- Bulged bases
- 8H6L|1|4A|U|31
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8H6L|1|4A|C|28
8H6L|1|4A|A|29
8H6L|1|4A|A|30
8H6L|1|4A|U|31
8H6L|1|4A|G|32
8H6L|1|4A|A|33
8H6L|1|4A|G|34
*
8H6L|1|4A|C|42
8H6L|1|4A|G|43
8H6L|1|4A|A|44
8H6L|1|4A|G|45
Current chains
- Chain 4A
- U4 snRNA
Nearby chains
- Chain 2D
- Splicing factor 3A subunit 1
- Chain 4B
- U4/U6 small nuclear ribonucleoprotein Prp3
- Chain 4D
- U4/U6 small nuclear ribonucleoprotein Prp31
- Chain 4E
- NHP2-like protein 1
- Chain 4G
- Pre-mRNA-processing factor 6
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