IL_8HL4_011

3D structure

PDB id

8HL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.62 Å

Loop

Sequence

CAUCAG*CUAUAACG

Length

14 nucleotides

Bulged bases

8HL4|1|A16S|U|256, 8HL4|1|A16S|U|292

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL4|1|A16S|C|254
8HL4|1|A16S|A|255
8HL4|1|A16S|U|256
8HL4|1|A16S|C|257
8HL4|1|A16S|A|258
8HL4|1|A16S|G|259
*
8HL4|1|A16S|C|289
8HL4|1|A16S|U|290
8HL4|1|A16S|A|291
8HL4|1|A16S|U|292
8HL4|1|A16S|A|293
8HL4|1|A16S|A|294
8HL4|1|A16S|C|295
8HL4|1|A16S|G|296

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain AS8E

30S ribosomal protein S8e

Chain S12P

30S ribosomal protein S12

Chain S17P

30S ribosomal protein S17