IL_8HL4_018
3D structure
- PDB id
- 8HL4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.62 Å
Loop
- Sequence
- GUGUCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 8HL4|1|A16S|G|496, 8HL4|1|A16S|A|498, 8HL4|1|A16S|U|500
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8HL4|1|A16S|G|481
8HL4|1|A16S|U|482
8HL4|1|A16S|G|483
8HL4|1|A16S|U|484
8HL4|1|A16S|C|485
8HL4|1|A16S|A|486
8HL4|1|A16S|G|487
*
8HL4|1|A16S|C|494
8HL4|1|A16S|G|495
8HL4|1|A16S|G|496
8HL4|1|A16S|U|497
8HL4|1|A16S|A|498
8HL4|1|A16S|A|499
8HL4|1|A16S|U|500
8HL4|1|A16S|A|501
8HL4|1|A16S|C|502
Current chains
- Chain A16S
- 16s rRNA (1493-MER)
Nearby chains
- Chain AEFG
- Elongation factor 2
- Chain AMRN
- mRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')
- Chain AS3P
- 30S ribosomal protein S3
- Chain S12P
- 30S ribosomal protein S12
Coloring options: