IL_8HL4_024

3D structure

PDB id

8HL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.62 Å

Loop

Sequence

CUUAAAGU*AACUGG

Length

14 nucleotides

Bulged bases

8HL4|1|A16S|U|598

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL4|1|A16S|C|570
8HL4|1|A16S|U|571
8HL4|1|A16S|U|572
8HL4|1|A16S|A|573
8HL4|1|A16S|A|574
8HL4|1|A16S|A|575
8HL4|1|A16S|G|576
8HL4|1|A16S|U|577
*
8HL4|1|A16S|A|595
8HL4|1|A16S|A|596
8HL4|1|A16S|C|597
8HL4|1|A16S|U|598
8HL4|1|A16S|G|599
8HL4|1|A16S|G|600

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain AS4E

30S ribosomal protein S4e

Chain AS4P

30S ribosomal protein S4

Chain AS8P

Small ribosomal subunit protein uS8

Chain S17P

30S ribosomal protein S17