3D structure

PDB id
8HNT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of anti-CRISPR protein AcrIIC4 bound to HpaCas9-sgRNA surveillance complex
Experimental method
X-RAY DIFFRACTION
Resolution
3.06 Å

Loop

Sequence
CUU*AAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Self-complementary: CUU,AAG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8HNT_003 not in the Motif Atlas
Geometric match to IL_8C3A_130
Geometric discrepancy: 0.1452
The information below is about IL_8C3A_130
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_44258.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
301

Unit IDs

8HNT|1|B|C|96
8HNT|1|B|U|97
8HNT|1|B|U|98
*
8HNT|1|B|A|113
8HNT|1|B|A|114
8HNT|1|B|G|115

Current chains

Chain B
sgRNA

Nearby chains

Chain A
CRISPR-associated endonuclease Cas9

Coloring options:


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