IL_8HSP_167
3D structure
- PDB id
- 8HSP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- CUGAAG*CGUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8HSP_167 not in the Motif Atlas
- Homologous match to IL_5J7L_351
- Geometric discrepancy: 0.1339
- The information below is about IL_5J7L_351
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_29471.1
- Basepair signature
- cWW-cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8HSP|1|a|C|2806
8HSP|1|a|U|2807
8HSP|1|a|G|2808
8HSP|1|a|A|2809
8HSP|1|a|A|2810
8HSP|1|a|G|2811
*
8HSP|1|a|C|2889
8HSP|1|a|G|2890
8HSP|1|a|U|2891
8HSP|1|a|G|2892
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain r
- 50S ribosomal protein L22
- Chain z
- 50S ribosomal protein L32
Coloring options: