IL_8HTZ_015
3D structure
- PDB id
- 8HTZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GG*UGACC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8HTZ_015 not in the Motif Atlas
- Homologous match to IL_4LFB_013
- Geometric discrepancy: 0.1145
- The information below is about IL_4LFB_013
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_03109.3
- Basepair signature
- cWW-cWS-tWH-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
8HTZ|1|A|G|292
8HTZ|1|A|G|293
*
8HTZ|1|A|U|304
8HTZ|1|A|G|305
8HTZ|1|A|A|306
8HTZ|1|A|C|307
8HTZ|1|A|C|308
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain P
- 30S ribosomal protein S16
Coloring options: