IL_8HU1_073

3D structure

PDB id

8HU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8HU1_073 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.4327

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

8HU1|1|a|C|274
8HU1|1|a|C|275
8HU1|1|a|U|276
8HU1|1|a|G|277
8HU1|1|a|A|278
8HU1|1|a|A|279
8HU1|1|a|U|280
8HU1|1|a|C|281
*
8HU1|1|a|G|359
8HU1|1|a|U|360
8HU1|1|a|G|361
8HU1|1|a|A|362
8HU1|1|a|G|363

Current chains

Chain a

23S rRNA

Nearby chains