IL_8HU1_102
3D structure
- PDB id
- 8HU1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 8HU1|1|a|U|1033
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8HU1_102 not in the Motif Atlas
- Homologous match to IL_7RQB_041
- Geometric discrepancy: 0.0743
- The information below is about IL_7RQB_041
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_43275.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 30
Unit IDs
8HU1|1|a|G|1031
8HU1|1|a|A|1032
8HU1|1|a|U|1033
8HU1|1|a|G|1034
*
8HU1|1|a|C|1121
8HU1|1|a|G|1122
8HU1|1|a|C|1123
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L36
- Chain b
- 5S ribosomal RNA; 5S rRNA
- Chain l
- 50S ribosomal protein L16
Coloring options: