IL_8HU1_114

3D structure

PDB id

8HU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

8HU1|1|a|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8HU1_114 not in the Motif Atlas

Homologous match to IL_5J7L_295

Geometric discrepancy: 0.1112

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

8HU1|1|a|C|1417
8HU1|1|a|G|1418
8HU1|1|a|A|1419
8HU1|1|a|A|1420
8HU1|1|a|G|1421
*
8HU1|1|a|C|1577
8HU1|1|a|U|1578
8HU1|1|a|A|1579
8HU1|1|a|A|1580
8HU1|1|a|G|1581

Current chains

Chain a

23S rRNA

Nearby chains