IL_8HUJ_001
3D structure
- PDB id
- 8HUJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the J-K-St region of EMCV IRES in complex with eIF4G-HEAT1 and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.76 Å
Loop
- Sequence
- UGAAG*CUAG
- Length
- 9 nucleotides
- Bulged bases
- 8HUJ|1|C|A|688
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8HUJ|1|C|U|685
8HUJ|1|C|G|686
8HUJ|1|C|A|687
8HUJ|1|C|A|688
8HUJ|1|C|G|689
*
8HUJ|1|C|C|779
8HUJ|1|C|U|780
8HUJ|1|C|A|781
8HUJ|1|C|G|782
Current chains
- Chain C
- IRES RNA (J-K-St)
Nearby chains
- Chain B
- Eukaryotic translation initiation factor 4 gamma 1
Coloring options: