IL_8I0V_010

3D structure

PDB id

8I0V (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of human post-Bact complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUCA*UCU

Length

7 nucleotides

Bulged bases

8I0V|1|G|U|89

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8I0V_010 not in the Motif Atlas

Geometric match to IL_4V88_457

Geometric discrepancy: 0.3817

The information below is about IL_4V88_457

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

8I0V|1|G|G|88
8I0V|1|G|U|89
8I0V|1|G|C|90
8I0V|1|G|A|91
*
8I0V|1|H|U|39
8I0V|1|H|C|40
8I0V|1|H|U|41

Current chains

Chain G

Pre-mRNA

Chain H

U2 snRNA

Nearby chains