IL_8I9Y_030
3D structure
- PDB id
- 8I9Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAAG*CUAGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 8I9Y|1|C1|A|914, 8I9Y|1|C1|G|918
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8I9Y|1|C1|G|786
8I9Y|1|C1|A|787
8I9Y|1|C1|A|788
8I9Y|1|C1|A|789
8I9Y|1|C1|G|790
*
8I9Y|1|C1|C|912
8I9Y|1|C1|U|913
8I9Y|1|C1|A|914
8I9Y|1|C1|G|915
8I9Y|1|C1|U|916
8I9Y|1|C1|A|917
8I9Y|1|C1|G|918
8I9Y|1|C1|C|919
Current chains
- Chain C1
- RNA (3341-MER)
Nearby chains
- Chain CS
- AdoMet-dependent rRNA methyltransferase SPB1
- Chain LC
- 60S ribosomal protein L4-like protein
- Chain LL
- 60S ribosomal protein L13
- Chain Lj
- Ribosomal protein L37
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