IL_8IA0_048
3D structure
- PDB id
- 8IA0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GACACCACAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 8IA0|1|C1|A|1186, 8IA0|1|C1|A|1283, 8IA0|1|C1|A|1284, 8IA0|1|C1|U|1287
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IA0|1|C1|G|1176
8IA0|1|C1|A|1177
8IA0|1|C1|C|1178
8IA0|1|C1|A|1179
8IA0|1|C1|C|1180
8IA0|1|C1|C|1181
8IA0|1|C1|A|1182
8IA0|1|C1|C|1183
8IA0|1|C1|A|1184
8IA0|1|C1|A|1185
8IA0|1|C1|A|1186
8IA0|1|C1|A|1187
*
8IA0|1|C1|U|1281
8IA0|1|C1|G|1282
8IA0|1|C1|A|1283
8IA0|1|C1|A|1284
8IA0|1|C1|A|1285
8IA0|1|C1|A|1286
8IA0|1|C1|U|1287
8IA0|1|C1|G|1288
8IA0|1|C1|G|1289
8IA0|1|C1|A|1290
8IA0|1|C1|U|1291
8IA0|1|C1|G|1292
8IA0|1|C1|G|1293
8IA0|1|C1|C|1294
8IA0|1|C1|G|1295
8IA0|1|C1|C|1296
Current chains
- Chain C1
- RNA (3341-MER)
Nearby chains
- Chain CH
- Nucleolar GTP-binding protein 1
- Chain CK
- Ribosome biogenesis protein NSA2 homolog
- Chain CL
- Putative GTP binding protein
- Chain LB
- 60S ribosomal protein L3-like protein
- Chain LO
- 60S ribosomal protein L16-like protein
- Chain Lf
- 60S ribosomal protein l33-like protein
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