IL_8IA0_144

3D structure

PDB id

8IA0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGAG*CGCCAGUGAAAUACC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IA0|1|C1|G|2428
8IA0|1|C1|G|2429
8IA0|1|C1|A|2430
8IA0|1|C1|G|2431
*
8IA0|1|C1|C|2438
8IA0|1|C1|G|2439
8IA0|1|C1|C|2440
8IA0|1|C1|C|2441
8IA0|1|C1|A|2442
8IA0|1|C1|G|2443
8IA0|1|C1|U|2444
8IA0|1|C1|G|2445
8IA0|1|C1|A|2446
8IA0|1|C1|A|2447
8IA0|1|C1|A|2448
8IA0|1|C1|U|2449
8IA0|1|C1|A|2450
8IA0|1|C1|C|2451
8IA0|1|C1|C|2452

Current chains

Chain C1

RNA (3341-MER)

Nearby chains

Chain CP

RNA methyltransferase nop2-like protein

Chain Lq

Ribosomal protein