IL_8IDT_023

3D structure

PDB id

8IDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State G

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8IDT|1|2|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IDT|1|2|A|466
8IDT|1|2|U|467
8IDT|1|2|U|468
8IDT|1|2|C|469
8IDT|1|2|A|470
8IDT|1|2|A|471
8IDT|1|2|C|472
*
8IDT|1|2|G|682
8IDT|1|2|C|683
8IDT|1|2|G|684
8IDT|1|2|C|685
8IDT|1|2|A|686
8IDT|1|2|U|687
8IDT|1|2|U|688
8IDT|1|2|U|689

Current chains

Chain 2

28S rRNA

Nearby chains

Chain l

60S ribosomal protein L28

Chain o

60S ribosomal protein L6