IL_8IDT_114

3D structure

PDB id

8IDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State G

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGGUC*GGCGCCUAGC

Length

15 nucleotides

Bulged bases

8IDT|1|2|G|3592, 8IDT|1|2|A|3596

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IDT|1|2|G|2901
8IDT|1|2|G|2902
8IDT|1|2|G|2903
8IDT|1|2|U|2904
8IDT|1|2|C|2905
*
8IDT|1|2|G|3589
8IDT|1|2|G|3590
8IDT|1|2|C|3591
8IDT|1|2|G|3592
8IDT|1|2|C|3593
8IDT|1|2|C|3594
8IDT|1|2|U|3595
8IDT|1|2|A|3596
8IDT|1|2|G|3597
8IDT|1|2|C|3598

Current chains

Chain 2

28S rRNA

Nearby chains

Chain a

60S ribosomal protein L19