IL_8IDY_022

3D structure

PDB id

8IDY (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State F

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8IDY|1|2|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IDY|1|2|A|466
8IDY|1|2|U|467
8IDY|1|2|U|468
8IDY|1|2|C|469
8IDY|1|2|A|470
8IDY|1|2|A|471
8IDY|1|2|C|472
*
8IDY|1|2|G|682
8IDY|1|2|C|683
8IDY|1|2|G|684
8IDY|1|2|C|685
8IDY|1|2|A|686
8IDY|1|2|U|687
8IDY|1|2|U|688
8IDY|1|2|U|689

Current chains

Chain 2

28S rRNA

Nearby chains

Chain l

60S ribosomal protein L28

Chain o

60S ribosomal protein L6