IL_8IDY_066

3D structure

PDB id

8IDY (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State F

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUCGCAGACCCGACGCCCGCCACG*CG

Length

26 nucleotides

Bulged bases

8IDY|1|2|C|1704, 8IDY|1|2|C|1707, 8IDY|1|2|G|1708, 8IDY|1|2|C|1718

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IDY|1|2|C|1694
8IDY|1|2|U|1695
8IDY|1|2|C|1696
8IDY|1|2|G|1697
8IDY|1|2|C|1698
8IDY|1|2|A|1699
8IDY|1|2|G|1700
8IDY|1|2|A|1701
8IDY|1|2|C|1702
8IDY|1|2|C|1703
8IDY|1|2|C|1704
8IDY|1|2|G|1705
8IDY|1|2|A|1706
8IDY|1|2|C|1707
8IDY|1|2|G|1708
8IDY|1|2|C|1709
8IDY|1|2|C|1714
8IDY|1|2|C|1715
8IDY|1|2|G|1716
8IDY|1|2|C|1717
8IDY|1|2|C|1718
8IDY|1|2|A|1719
8IDY|1|2|C|1720
8IDY|1|2|G|1721
*
8IDY|1|2|C|1841
8IDY|1|2|G|1842

Current chains

Chain 2

28S rRNA

Nearby chains

Chain C

60S ribosomal protein L29

Chain D

60S ribosomal protein L4

Chain Z

60S ribosomal protein L18

Chain c

60S ribosomal protein L21

Chain p

60S ribosomal protein L7