IL_8IDY_129
3D structure
- PDB id
- 8IDY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGGGGCGAGCCCCGAGGGGCUCUCGCUUCUGGCGCCAA(B8W)C*GCGAC
- Length
- 45 nucleotides
- Bulged bases
- 8IDY|1|2|G|4115, 8IDY|1|2|C|4116, 8IDY|1|2|U|4117, 8IDY|1|2|U|4118, 8IDY|1|2|C|4119, 8IDY|1|2|U|4120, 8IDY|1|2|G|4121
- QA status
- Modified nucleotides: B8W
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IDY|1|2|G|4091
8IDY|1|2|G|4092
8IDY|1|2|G|4093
8IDY|1|2|G|4094
8IDY|1|2|G|4095
8IDY|1|2|C|4096
8IDY|1|2|G|4097
8IDY|1|2|A|4098
8IDY|1|2|G|4099
8IDY|1|2|C|4100
8IDY|1|2|C|4101
8IDY|1|2|C|4102
8IDY|1|2|C|4103
8IDY|1|2|G|4104
8IDY|1|2|A|4105
8IDY|1|2|G|4106
8IDY|1|2|G|4107
8IDY|1|2|G|4108
8IDY|1|2|G|4109
8IDY|1|2|C|4110
8IDY|1|2|U|4111
8IDY|1|2|C|4112
8IDY|1|2|U|4113
8IDY|1|2|C|4114
8IDY|1|2|G|4115
8IDY|1|2|C|4116
8IDY|1|2|U|4117
8IDY|1|2|U|4118
8IDY|1|2|C|4119
8IDY|1|2|U|4120
8IDY|1|2|G|4121
8IDY|1|2|G|4122
8IDY|1|2|C|4123
8IDY|1|2|G|4124
8IDY|1|2|C|4125
8IDY|1|2|C|4126
8IDY|1|2|A|4127
8IDY|1|2|A|4128
8IDY|1|2|B8W|4129
8IDY|1|2|C|4130
*
8IDY|1|2|G|4154
8IDY|1|2|C|4155
8IDY|1|2|G|4156
8IDY|1|2|A|4157
8IDY|1|2|C|4158
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L30
- Chain F
- 60S ribosomal protein L34
- Chain G
- 60S ribosomal protein L7a
- Chain X
- 60S ribosomal protein L37a
- Chain g
- 60S ribosomal protein L23a
- Chain i
- 60S ribosomal protein L27
- Chain m
- 60S ribosomal protein L8
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