IL_8IE3_046

3D structure

PDB id

8IE3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGCGGA*UGCGCC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IE3|1|2|G|1170
8IE3|1|2|G|1171
8IE3|1|2|C|1172
8IE3|1|2|G|1173
8IE3|1|2|G|1174
8IE3|1|2|A|1175
*
8IE3|1|2|U|1186
8IE3|1|2|G|1187
8IE3|1|2|C|1188
8IE3|1|2|G|1189
8IE3|1|2|C|1190
8IE3|1|2|C|1191

Current chains

Chain 2

28S rRNA

Nearby chains

Chain 5

5S ribosomal RNA; 5S rRNA

Chain r

60S ribosomal protein L5