IL_8IE3_188
3D structure
- PDB id
- 8IE3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CCC*GGAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IE3_188 not in the Motif Atlas
- Homologous match to IL_4WF9_114
- Geometric discrepancy: 0.3848
- The information below is about IL_4WF9_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10810.1
- Basepair signature
- cWW-L-cWS-cSH-cWW
- Number of instances in this motif group
- 1
Unit IDs
8IE3|1|5|C|28
8IE3|1|5|C|29
8IE3|1|5|C|30
*
8IE3|1|5|G|47
8IE3|1|5|G|48
8IE3|1|5|A|49
8IE3|1|5|A|50
8IE3|1|5|G|51
Current chains
- Chain 5
- 5S rRNA
Nearby chains
- Chain T
- 60S ribosomal protein L11
- Chain r
- 60S ribosomal protein L5
Coloring options: