IL_8IFC_001
3D structure
- PDB id
- 8IFC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Arbekacin-bound E.coli 70S ribosome in the PURE system
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUC*GAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CUC,GAG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IFC_001 not in the Motif Atlas
- Homologous match to IL_4V90_066
- Geometric discrepancy: 0.3182
- The information below is about IL_4V90_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IFC|1|5|C|11
8IFC|1|5|U|12
8IFC|1|5|C|13
*
8IFC|1|5|G|22
8IFC|1|5|A|23
8IFC|1|5|G|24
Current chains
- Chain 5
- A-site tRNA-Phe
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: