IL_8IFD_026

3D structure

PDB id

8IFD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dibekacin-added human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GUCGGCG*CCCCGAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFD|1|1A|G|493
8IFD|1|1A|U|494
8IFD|1|1A|C|495
8IFD|1|1A|G|496
8IFD|1|1A|G|497
8IFD|1|1A|C|498
8IFD|1|1A|G|499
*
8IFD|1|1A|C|655
8IFD|1|1A|C|656
8IFD|1|1A|C|657
8IFD|1|1A|C|658
8IFD|1|1A|G|659
8IFD|1|1A|A|660
8IFD|1|1A|C|661

Current chains

Chain 1A

28S ribosomal RNA

Nearby chains

Chain 1F

60S ribosomal protein L4

Chain 2K

60S ribosomal protein L18