IL_8IFD_201

3D structure

PDB id

8IFD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dibekacin-added human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

AGGGCAAGUC*GCU

Length

13 nucleotides

Bulged bases

8IFD|1|2m|U|607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFD|1|2m|A|599
8IFD|1|2m|G|600
8IFD|1|2m|G|601
8IFD|1|2m|G|602
8IFD|1|2m|C|603
8IFD|1|2m|A|604
8IFD|1|2m|A|605
8IFD|1|2m|G|606
8IFD|1|2m|U|607
8IFD|1|2m|C|608
*
8IFD|1|2m|G|635
8IFD|1|2m|C|636
8IFD|1|2m|U|637

Current chains

Chain 2m

18S ribosomal RNA

Nearby chains

Chain 2p

40S ribosomal protein S3

Chain 3G

40S ribosomal protein S2

Chain 3I

40S ribosomal protein S9

Chain 3Q

40S ribosomal protein S30