IL_8IFD_219
3D structure
- PDB id
- 8IFD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Dibekacin-added human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GAGGUUC*GUUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IFD|1|2m|G|1041
8IFD|1|2m|A|1042
8IFD|1|2m|G|1043
8IFD|1|2m|G|1044
8IFD|1|2m|U|1045
8IFD|1|2m|U|1046
8IFD|1|2m|C|1047
*
8IFD|1|2m|G|1071
8IFD|1|2m|U|1072
8IFD|1|2m|U|1073
8IFD|1|2m|C|1074
Current chains
- Chain 2m
- 18S ribosomal RNA
Nearby chains
- Chain 1A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 1D
- 60S ribosomal protein L8
- Chain 2j
- 60S ribosomal protein L37a
- Chain 3C
- 40S ribosomal protein S26
- Chain 3K
- 40S ribosomal protein S13
- Chain 3L
- 40S ribosomal protein S14
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